---
issue: 574
issue_title: "Support configurable shell-tool aliases for exec_command"
---

# Retro: #574 — Support configurable shell-tool aliases for `exec_command`

## Stage: Planning (2026-07-13T18:30:00Z)

### Session summary

Planned Phase 11 Step 3 (batch "shell-tool-aliases" tail): the enforcement gate that consumes the `shellTools` config landed in `#580`.
Produced a 5-cycle plan (`0574-gate-aliased-shell-tools-bash-stack.md`) routing an aliased shell tool (e.g. `exec_command`) through the full bash stack at parity with native `bash` — command decomposition, wrapper flooring, the `<unparseable-bash-command>` fail-closed sentinel, bash path + external-directory token gates, `bash:` rules — plus full `workdir` parity (effective resolve base + `external_directory` gating).

### Observations

- **Third-party issue, but operator-adopted.**
  `#574` was filed by `marcinkardas` (gh user is `gotgenes`), so the `ask-user` direction gate was mandatory.
  The operator confirmed **implement as roadmapped** and **full workdir parity now** — the direction was already settled by the roadmap (Step 3) and by `#580` shipping the config half explicitly for this.
  The operator drilled into two design questions before deciding (how it is configured; how `workdir` relates to cwd), so the plan front-loads a concrete config example and the workdir/cwd model.
- **Key architectural finding: `workdir` needs almost no rearchitecture.**
  `PathNormalizer` bakes the session cwd for the **containment boundary only**; the **resolve base** is threaded per-token as the walk's `EffectiveBase.offset` (how inline `cd` already works).
  So `workdir` is "an implicit leading `cd <workdir>`" — reuse the existing cd-fold machinery.
  Two contained additions in the bash parse layer: seed the walk's initial `EffectiveBase` from `workdir` (factor `deriveBaseFromCdTarget` out of `foldCd`), and add `workdir`'s own `AccessPath` to the external set when outside cwd (a real `cd /etc` flags `/etc` via its argument token; the seed has none, so add it).
  No change to containment, `AccessPath`, or the `external_directory` policy — the gate flags workdir with no signature change.
- **Single dispatch point, `classifyToolKind` left alone.**
  The alias consult is a **separate** function — `resolveShellInvocation(toolName, input, aliases) → { command, workdir } | null` in `tool-kind.ts` — because it needs config and returns a richer product than a `ToolKind`.
  Keeping `classifyToolKind` config-free preserves its ADR-0002 string boundary and its config-free presentation/manager consumers.
  Native bash routes through the same seam (`{ command: input.command, workdir: undefined }`), so the two bash gates drop their hardcoded `toolName === "bash"` / `input.command` derivations.
- **The real weight is aliasing plumbing, not workdir.**
  The bash gates and pipeline hardcode `toolName === "bash"` / `input.command` in a handful of sites; threading the resolved `ShellInvocation` through them (steps 2–3) is the bulk.
  `workdir` (step 4) is a small, reuse-heavy parse-layer seam.
- **Presentation nuance:** an aliased shell command must present on the **`bash` surface** (so a session "allow" writes a `bash:` rule and the decision value is the command) while keeping the invoked tool name (`exec_command`) in the review log — the plan threads the effective shell command/surface into `describeToolGate` / `deriveDecisionValue` / `deriveSuggestionValue`.
- **`fallow dead-code` batch trap (from `#580`):** the step-1 `resolveShellInvocation` export has no consumer until step 3.
  The plan's batch note runs the `dead-code` gate at the step-3 boundary, not step-1 — the same speculative-export class `#580`'s retro flagged.
- **Open question deferred to TDD:** whether `normalizeInput`'s bash branch needs alias-awareness depends on whether any consumer routes an aliased `(toolName, input)` through `permission-manager.checkPermission` (the enforcement path is the gate pipeline, which uses `resolveShellInvocation` directly).
  Traced in step 3; no follow-up filed pre-emptively.
- **Release:** ship now — batch tail; landing Step 3 cuts the release carrying both the deferred `#580` `feat:` and this step's `feat:` commits.
  Next step: `/tdd-plan` (this plan has test cycles).

## Stage: Implementation — TDD (2026-07-13T18:20:00Z)

### Session summary

Implemented all five planned TDD cycles plus one preparatory refactor, landing the shell-tool aliasing enforcement: `resolveShellInvocation` dispatch point, `BashProgram` owning its source command, pipeline consumption, full `workdir` parity, and docs/roadmap.
Test count `2387 → 2418` (+31); `pnpm run check`, root `pnpm run lint`, and `pnpm fallow dead-code` all green.
Pre-completion reviewer: **WARN** (no FAILs) — both warnings addressed with fast-follow commits before shipping.

### Observations

- **Mid-implementation design pivot (operator-prompted): dropped the `command` parameter for `BashProgram.commandText()`.**
  The plan's step 2 threaded a `command` parameter into the two bash gates.
  The operator flagged that `command` is redundant state — a projection of the shell invocation that always co-travels with `bashProgram` (the parsed form of the *same* command).
  The right collaborator is `BashProgram` itself (it is constructed from the command), so it now exposes `commandText()` and the gates read it, dropping the parameter.
  Since step 2 was unpushed, I `git reset --mixed HEAD~1` to drop it and folded the mechanism into the step-3 feat.
  Net: the two bash gates kept their original `(tcc, bashProgram, resolver)` signature (no churn, native-bash regression suites unmodified), and the redundant-param smell never shipped.
- **`workdir` needed almost no rearchitecture** — as the plan predicted, `PathNormalizer` already separates the containment boundary (baked session cwd) from the resolve base (per-token walk offset), so `workdir` is "an implicit leading `cd <workdir>`": seed the walk's initial `EffectiveBase` (reusing the `deriveBaseFromCdTarget` helper the prep refactor extracted from `foldCd`) and add the workdir's own `AccessPath` to the external set when outside cwd.
  Containment stays measured against the session cwd, so a workdir outside cwd cannot widen the sandbox — pinned by tests asserting both the workdir and a relative token resolve/flag correctly.
- **Deviations from the plan's Module-Level Changes** (all sound, not gaps):
  - `input-normalizer.ts` and `tool-input-path.ts` were **not** modified — the open question resolved to "not needed": the enforcement path is the gate pipeline (which consults `resolveShellInvocation` directly), and the advisory service (`bash-advisory-check.ts`) resolves `bash` by explicit command string, so neither sees an aliased `(toolName, input)`.
  - `helpers.ts` (`deriveDecisionValue`) was **not** modified — `tool.ts`'s `describeToolGate` threads the effective `bash` `gateSurface` into it, so no change was needed there.
  - `config/config.example.json` was **not** modified — the `shellTools` block already shipped in `#580`.
  - `ShellToolAlias` was **not** reintroduced (the plan's Non-Goal suggested it) — `resolveShellInvocation` uses indexed access on `ShellToolsConfig`, so a named export would have re-tripped the `#580` speculative-export/`fallow` trap.
- **Pre-completion WARNs, both addressed before shipping:**
  1. The plan promised aliased-tool cases for the `#490`/`#481` wrapper-flooring and `#452` fail-closed security invariants, which were missing (they held structurally via shared `resolveBashCommandCheck`).
     Added two integration tests (`sudo` → `<indirection-bash-wrapper>`, `bash -c` → `<opaque-bash-wrapper>`) through the real parse (`d7d19d2e`), so a future `toolName === "bash"` special-case in the flooring path is caught.
  2. The package skill was silent on the new dispatch point — added a `shellTools`/`resolveShellInvocation` gate-parity paragraph (`c6881403`).
- **Parallel-session interaction:** a peer session landed `#583` retro notes on shared `main` between my prep refactor and step 1; my prep refactor rode onto `origin/main` via that push, leaving five unpushed commits.
  History stayed linear; no conflict.
- **Release:** ship now — batch "shell-tool-aliases" tail; landing this cuts the release carrying both the deferred `#580` `feat:` and this issue's `feat:` commits.
  Next step: `/ship-issue`.

## Stage: Final Retrospective (2026-07-13T23:40:00Z)

### Session summary

Shipped `#574` end-to-end in one continuous session (plan → TDD → ship → retro): `@gotgenes/pi-permission-system` `v20.6.0`, closing the "shell-tool-aliases" batch (Phase 11 Steps 2–3) alongside `#580`.
An aliased shell tool (`exec_command`) is now gated at full parity with native `bash` — command decomposition, wrapper flooring, fail-closed sentinel, `bash:` rules, and `workdir`-as-base + `external_directory` gating — landed across a prep refactor and six commits, `+31` tests, CI green on `5523df76`.
Two operator design interventions and the pre-completion gate each improved the result before it shipped.

### Observations

#### What went well

- **A single Socratic operator question produced a strictly better design with zero shipped churn.**
  Mid-TDD, the operator asked whether the `command` parameter "should instead be some state in an object that would be a good collaborator" — a redirect delivered as a question, not a correction.
  Because the step-2 commit was unpushed, `git reset --mixed HEAD~1` dropped it and folded `BashProgram.commandText()` into the feat, so the two bash gates kept their **original** `(tcc, bashProgram, resolver)` signature: the redundant param never shipped and the native-bash regression suites needed zero churn.
  Recovering from a plan-level design miss with no residue is the notable win.
- **The pre-completion reviewer earned its keep.**
  Structural-sharing reasoning had rationalized away the aliased-tool wrapper-flooring / fail-closed tests ("they hold because `resolveBashCommandCheck` is shared"), but the plan's own TDD Red list had promised them as the mitigation for two security invariants.
  The fresh-context gate flagged the gap; two fast-follow commits (`d7d19d2e`, `c6881403`) closed it before ship, so a future `toolName === "bash"` special-case in the flooring path is now caught by a test.
- **The `workdir`-as-implicit-`cd` read held from plan to code.**
  Recognizing at plan time that `PathNormalizer` already separates the containment boundary (baked session cwd) from the resolve base (per-token walk offset) meant `workdir` needed no rearchitecture — seed the initial `EffectiveBase` (via the `deriveBaseFromCdTarget` the prep refactor extracted) and add the workdir's own `AccessPath` to the external set.
  Containment stayed measured against the session cwd, so a workdir outside cwd cannot widen the sandbox.

#### What caused friction (agent side)

- `wrong-abstraction` (user-caught) — the plan's Design Overview threaded three facets of one concept (`shell`, `command`, `bashProgram`) as separate parameters, where `command` is a projection of `bashProgram` (the parsed form of that same command).
  The right home was `BashProgram` owning its source command.
  Neither the plan-time `design-review` pass nor the `tidy-first-assessor` flagged it; the operator did.
  Impact: one `git reset --mixed HEAD~1` plus a reshape of the step-2/step-3 boundary — no shipped churn (caught pre-push), but the redundant design was committed once before the redirect.
- `scope-drift` (self-identified via the pre-completion gate) — the plan's TDD step-3 Red list explicitly named the aliased-tool wrapper-flooring and fail-closed test cases, but they were skipped during implementation on the rationale that the behavior holds structurally.
  Impact: two fast-follow commits before ship; no rework beyond that.
- `instruction-violation` (self-identified) — named a shell-loop variable `status` in the release-PR poll loop; zsh reserves `$status` read-only, so the first poll aborted with `read-only variable: status`.
  `AGENTS.md` documents this exact rule ("do not name it `status` … use `state`/`rc`").
  Impact: one re-run (~15 s); fixed to `state` immediately.

#### What caused friction (user side)

- None material — both operator interventions (the `workdir`/cwd questions at plan time, the `command`-redundancy question at TDD time) were strategic redirects framed as questions, which is the ideal intervention style: each steered a cleaner outcome without dictating the mechanism.
  If anything, the `command`-redundancy insight could have surfaced at the plan-review gate rather than after step 2 committed — but that is an agent-side design-review gap, not a user one.

### Diagnostic details

- **Model-performance correlation** — both subagents (`tidy-first-assessor`, `pre-completion-reviewer`) ran on `anthropic/claude-sonnet-5`, appropriate for read + judgment work; the main session ran on `anthropic/claude-opus-4-8` with a `sonnet-5` stretch.
  No reasoning-weak-on-judgment or costly-on-mechanical mismatch.
- **Escalation-delay tracking** — no `rabbit-hole` sequences; the zsh `status` error was resolved in one follow-up call, and the release-PR `UNSTABLE`/`IN_PROGRESS` check was handled by the documented wait-then-retry protocol (no premature `gh pr merge` fallback while a check was running).
- **Unused-tool detection** — no gaps; `colgrep` drove the planning exploration, and the `tidy-first-assessor` / `pre-completion-reviewer` subagents both ran and both produced actionable findings.
- **Feedback-loop gap analysis** — verification ran incrementally (per-cycle `tsc` + the affected test file, full suite + root `lint` + `fallow dead-code` at each step boundary), not end-only; the pre-completion gate ran after the last step as designed.
  No gap.

### Changes made

1. Appended this Final Retrospective stage entry to `packages/pi-permission-system/docs/retro/0574-gate-aliased-shell-tools-bash-stack.md`.
2. Added a **projection parameter** check to `.pi/skills/design-review/SKILL.md` (check #1, Dependency width): flag a parameter derivable from a sibling parameter and give the value to the object that owns it — the `command`/`bashProgram` redundancy the operator caught mid-TDD.
   Rationale lives here in the retro; the skill carries the rule plus a one-line example with a `Refs #574` pointer.